获取基因Binder详情
<p>[TOC]</p>
<h5>简要描述</h5>
<ul>
<li>获取基因Binder详情</li>
</ul>
<h5>请求URL</h5>
<ul>
<li><code>http://119.136.27.201:3200/target/detail/binder/detail</code>
<h5>请求方式</h5></li>
<li>GET</li>
</ul>
<h5>参数</h5>
<table>
<thead>
<tr>
<th style="text-align: left;">参数名</th>
<th style="text-align: left;">必选</th>
<th style="text-align: left;">类型</th>
<th>说明</th>
</tr>
</thead>
<tbody>
<tr>
<td style="text-align: left;">id</td>
<td style="text-align: left;">是</td>
<td style="text-align: left;">int</td>
<td>binder id, 由获取binder表单获取</td>
</tr>
</tbody>
</table>
<h5>返回示例</h5>
<pre><code>{
'data': {
'id': 21,
'gene': 'HTT',
'motif_name': 'HTT_B5-2998',
'benchiling_registry_id': 'BNDR0052',
'sequence': 'CCGGGACGGGTCCAAGATGGACGGCCGCTCAGGTTCTGCTTTTACCTGCGGCCCAG',
'position': '5-2998\nOther',
'structure_type': 'Other',
'region': 'Other',
'url': 'https://revirtx.benchling.com/revirtx/f/lib_Nz4dgQWg-registry/seq_DBxjoDPq-htt_b5-2998/edit',
'sequence_alone': {
'annotations': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/sequence_based/consensus/annotations.png',
'consensus': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/sequence_based/consensus/consensus.png',
'3wj motifs': [{
'motif_name': 'M9',
'sequence': 'UCACCCUGAGGUAUUUGGUGCCCUUGCUGCAGCAGCAGGUCAAGGACACAAGCCUGAAAGGCAGCUUCGGAGUGA',
'positions': '1088-1162\nunknown',
'structure': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/sequence_based/3WJ_Motifs/1088_1162/structure.png',
'start': 1088,
'end': 1162
}],
'scanfold motifs': [{
'motif_name': 's1',
'sequence': 'CAGCUGUGAGGAACUGUGUCAUGAGUCUCUGCAGCAGCAGCUACAGUGAGUUAGGACUGCAGCUGAUCAUCGAUGUGCUGACUCUGAGGAACAGUUCCUAUUGGCUG',
'positions': '2623-2729\nunknown',
'structure': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/sequence_based/ScanFold_Motifs/2623_2729/structure.png',
'start': 2623,
'end': 2729
}]
},
'shape_map': {
'annotations': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/binder/consensus/annotations.png',
'consensus': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/binder/consensus/consensus.png',
'3wj motifs': [{
'motif_name': 'M9',
'sequence': 'UGGCGUGCUGCUCACCCUGAGGUAUUUGGUGCCCUUGCUGCAGCAGUCAGCAGGUCAUGACAUCAUCACAGAACAGCCACGGUCA',
'positions': '1077-1644\nunknown',
'structure': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/binder/3WJ_Motifs/1077_1644/structure.png',
'start': 1077,
'end': 1644
}],
'scanfold motifs': [{
'motif_name': 's2',
'sequence': 'CAGCUGUGAGGAACUGUGUCAUGAGUCUCUGCAGCAGCAGCUACAGUGAGUUAGGACUGCAGCUGAUCAUCGAUGUGCUGACUCUGAGGAACAGUUCCUAUUGGCUG',
'positions': '2623-2729\nunknown',
'structure': 'http://119.136.27.201:15555/binder_dev/HTT/ENST00000355072.11/BNDR0052/binder/ScanFold_Motifs/2623_2729/structure.png',
'start': 2623,
'end': 2729
}]
},
'eclipsebio': {
'annotations': '',
'consensus': '',
'3wj motifs': [],
'scanfold motifs': []
}
},
'code': 200,
'message': 'success'
}</code></pre>
<h5>返回参数说明</h5>
<table>
<thead>
<tr>
<th style="text-align: left;">参数名</th>
<th style="text-align: left;">类型</th>
<th>说明</th>
</tr>
</thead>
<tbody>
<tr>
<td style="text-align: left;">gene</td>
<td style="text-align: left;">string</td>
<td>基因名称</td>
</tr>
<tr>
<td style="text-align: left;">motif_name</td>
<td style="text-align: left;">string</td>
<td>binder名称</td>
</tr>
<tr>
<td style="text-align: left;">benchiling_registry_id</td>
<td style="text-align: left;">string</td>
<td>binder benchling id</td>
</tr>
<tr>
<td style="text-align: left;">sequence</td>
<td style="text-align: left;">string</td>
<td>binder序列</td>
</tr>
<tr>
<td style="text-align: left;">position</td>
<td style="text-align: left;">string</td>
<td>binder位置</td>
</tr>
<tr>
<td style="text-align: left;">structure_type</td>
<td style="text-align: left;">string</td>
<td>binder结构类型</td>
</tr>
<tr>
<td style="text-align: left;">region</td>
<td style="text-align: left;">string</td>
<td>binder所在区域</td>
</tr>
<tr>
<td style="text-align: left;">shape_map</td>
<td style="text-align: left;">json</td>
<td>shape_map分析图片和表单数据</td>
</tr>
<tr>
<td style="text-align: left;">sequence_alone</td>
<td style="text-align: left;">json</td>
<td>sequence分析图片和表单数据</td>
</tr>
<tr>
<td style="text-align: left;">eclipsebio</td>
<td style="text-align: left;">json</td>
<td>eclipsebio分析图片和表单数据</td>
</tr>
<tr>
<td style="text-align: left;">annotations</td>
<td style="text-align: left;">string</td>
<td>annotations图片链接url， 用于显示图片</td>
</tr>
<tr>
<td style="text-align: left;">consensus</td>
<td style="text-align: left;">string</td>
<td>consensus图片链接url， 用于显示图片</td>
</tr>
<tr>
<td style="text-align: left;">3wj motifs</td>
<td style="text-align: left;">list</td>
<td>3wj motifs 数据表单</td>
</tr>
<tr>
<td style="text-align: left;">scanfold motifs</td>
<td style="text-align: left;">list</td>
<td>scanfold motifs 数据表单</td>
</tr>
<tr>
<td style="text-align: left;">motif_name</td>
<td style="text-align: left;">string</td>
<td>序列名称</td>
</tr>
<tr>
<td style="text-align: left;">sequence</td>
<td style="text-align: left;">string</td>
<td>序列内容</td>
</tr>
<tr>
<td style="text-align: left;">positions</td>
<td style="text-align: left;">string</td>
<td>序列位置</td>
</tr>
<tr>
<td style="text-align: left;">start</td>
<td style="text-align: left;">int</td>
<td>序列起始位置</td>
</tr>
<tr>
<td style="text-align: left;">end</td>
<td style="text-align: left;">int</td>
<td>序列终止位置</td>
</tr>
<tr>
<td style="text-align: left;">structure</td>
<td style="text-align: left;">string</td>
<td>序列图片链接</td>
</tr>
</tbody>
</table>
<h5>备注</h5>
<p>V10 版本增加了3wj motifs和scanfold motifs 表单</p>